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1

Artificial Intelligence and Deep Learning in Pathology || Artificial intelligence and the interplay between tumor and immunity

Saltz, Joel Haskin

Year:

2021

File:

PDF, 2.01 MB

2021

2

Interprocedural Data Flow Based Optimizations for Distributed Memory Compilation

GAGAN AGRAWAL, JOEL SALTZ

Journal:

Software: Practice and Experience

Year:

1997

Language:

english

File:

PDF, 211 KB

english, 1997

3

An XML-based System for Synthesis of Data from Disparate Databases

Tahsin Kurc, Daniel A. Janies, Andrew D. Johnson, Stephen Langella, Scott Oster, Shannon Hastings, Farhat Habib, Terry Camerlengo, David Ervin, Umit V. Catalyurek, Joel H. Saltz

Journal:

Journal of the American Medical Informatics Association

Year:

2006

Language:

english

File:

PDF, 582 KB

english, 2006

4

The Analytic Information Warehouse (AIW): A platform for analytics using electronic health record data

Post, Andrew R., Kurc, Tahsin, Cholleti, Sharath, Gao, Jingjing, Lin, Xia, Bornstein, William, Cantrell, Dedra, Levine, David, Hohmann, Sam, Saltz, Joel H.

Journal:

Journal of Biomedical Informatics

Year:

2013

Language:

english

File:

PDF, 3.89 MB

english, 2013

5

[IEEE Distributed Processing Symposium (IPDPS) - Miami, FL, USA (2008.04.14-2008.04.18)] 2008 IEEE International Symposium on Parallel and Distributed Processing - Designing and parameterizing a workflow for optimization: A case study in biomedical imaging

Kumar, Vijay S., Hall, Mary, Kim, Jihie, Gil, Yolanda, Kure, Tahsin, Deelman, Ewa, Ratnakar, Varun, Saltz, Joel

Year:

2008

File:

PDF, 417 KB

2008

6

[IEEE Distributed Processing Symposium (IPDPS) - Miami, FL, USA (2008.04.14-2008.04.18)] 2008 IEEE International Symposium on Parallel and Distributed Processing - Translational research design templates, Grid computing, and HPC

Saltz, Joel, Oster, Scott, Hastings, Shannon, Langella, Stephen, Ferreira, Renato, Permar, Justin, Sharma, Ashish, Ervin, David, Pan, Tony, Catalyurek, Umit, Kurc, Tahsin

Year:

2008

Language:

english

File:

PDF, 795 KB

english, 2008

7

Active disks

Acharya, Anurag, Uysal, Mustafa, Saltz, Joel

Journal:

ACM SIGOPS Operating Systems Review

Year:

1998

Language:

english

File:

PDF, 1.50 MB

english, 1998

8

Implementation of a parallel unstructured Euler solver on shared- and distributed-memory architectures

D. J. Mavriplis, Raja Das, Joel Saltz, R. E. Vermeland

Journal:

The Journal of Supercomputing

Year:

1995

Language:

english

File:

PDF, 1.22 MB

english, 1995

9

Effective IT governance in healthcare organisations: a tale of two organisations

Smaltz, Detlev H., Carpenter, Randy, Saltz, Joel

Journal:

International Journal of Healthcare Technology and Management

Year:

2007

Language:

english

File:

PDF, 236 KB

english, 2007

10

[IEEE 2019 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) - Long Beach, CA, USA (2019.6.15-2019.6.20)] 2019 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) - Robust Histopathology Image Analysis: To Label or to Synthesize?

Hou, Le, Agarwal, Ayush, Samaras, Dimitris, Kurc, Tahsin M., Gupta, Rajarsi R., Saltz, Joel H.

Year:

2019

Language:

english

File:

PDF, 9.85 MB

english, 2019

11

The design and evaluation of a high-performance earth science database

Carter T. Shock, Chialin Chang, Bongki Moon, Anurag Acharya, Larry Davis, Joel Saltz, Alan Sussman

Journal:

Parallel Computing

Year:

1998

Language:

english

File:

PDF, 1.85 MB

english, 1998

12

Spatial Organization and Molecular Correlation of Tumor-Infiltrating Lymphocytes Using Deep Learning on Pathology Images

Saltz, Joel, Gupta, Rajarsi, Hou, Le, Kurc, Tahsin, Singh, Pankaj, Nguyen, Vu, Samaras, Dimitris, Shroyer, Kenneth R., Zhao, Tianhao, Batiste, Rebecca, Van Arnam, John, Shmulevich, Ilya, Rao, Arvind U

Journal:

Year:

2018

Language:

english

File:

PDF, 4.00 MB

english, 2018

13

Dataset of segmented nuclei in hematoxylin and eosin stained histopathology images of ten cancer types

Hou, Le, Gupta, Rajarsi, Van Arnam, John S., Zhang, Yuwei, Sivalenka, Kaustubh, Samaras, Dimitris, Kurc, Tahsin M., Saltz, Joel H.

Journal:

Scientific Data

Year:

2020

File:

PDF, 2.71 MB

2020

14

Sparse Autoencoder for Unsupervised Nucleus Detection and Representation in Histopathology Images

Hou, Le, Nguyen, Vu, Kanevsky, Ariel B., Samaras, Dimitris, Kurc, Tahsin M., Zhao, Tianhao, Gupta, Rajarsi R., Gao, Yi, Chen, Wenjin, Foran, David, Saltz, Joel H.

Journal:

Pattern Recognition

Year:

2018

Language:

english

File:

PDF, 6.92 MB

english, 2018

15

Resource-aware metacomputing

Acharya, Anurag, Ranganathan, M., Saltz, Joel

Journal:

Concurrency Practice and Experience

Year:

1997

Language:

english

File:

PDF, 421 KB

english, 1997

16

Efficient irregular wavefront propagation algorithms on hybrid CPU–GPU machines

Teodoro, George, Pan, Tony, Kurc, Tahsin M., Kong, Jun, Cooper, Lee A.D., Saltz, Joel H.

Journal:

Parallel Computing

Year:

2013

Language:

english

File:

PDF, 1.74 MB

english, 2013

17

[IEEE 2019 8th Brazilian Conference on Intelligent Systems (BRACIS) - Salvador, Brazil (2019.10.15-2019.10.18)] 2019 8th Brazilian Conference on Intelligent Systems (BRACIS) - Increasing Accuracy of Medical CNN Applying Optimization Algorithms: An Image Classification Case

Marconi Ramos, Rafael, Ghedini Ralha, Celia, Kurc, Tahsin M., Saltz, Joel H., Teodoro, George

Year:

2019

Language:

english

File:

PDF, 325 KB

english, 2019

18

Parallel four-dimensional Haralick texture analysis for disk-resident image datasets

Brent Woods, Bradley Clymer, Johannes Heverhagen, Michael Knopp, Joel Saltz, Tahsin Kurc

Journal:

Concurrency and Computation: Practice and Experience

Year:

2007

Language:

english

File:

PDF, 521 KB

english, 2007

19

Sensitivity analysis in digital pathology: Handling large number of parameters with compute expensive workflows

Gomes, Jeremias, Barreiros, Willian, Kurc, Tahsin, Melo, Alba C.M.A., Kong, Jun, Saltz, Joel H., Teodoro, George

Journal:

Computers in Biology and Medicine

Year:

2019

Language:

english

File:

PDF, 3.04 MB

english, 2019

20

[IEEE Distributed Processing Symposium (IPDPS) - Miami, FL, USA (2008.04.14-2008.04.18)] 2008 IEEE International Symposium on Parallel and Distributed Processing - A dynamic scheduling approach for coordinated wide-area data transfers using GridFTP

Gaurav Khanna,, Umit Catalyurek,, Tahsin Kurc,, Rajkumar Kettimuthu,, Sadayappan, P., Saltz, Joel

Year:

2008

Language:

english

File:

PDF, 491 KB

english, 2008

21

A community prevention trial to reduce alcohol-involved accidental injury and death: overview

Harold D. Holder, Robert F. Saltz, Joel W. Grube, Robert B. Voas, Paul J. Gruenewald, Andrew J. Treno

Journal:

Year:

1997

Language:

english

File:

PDF, 269 KB

english, 1997

22

Liver steatosis assessment: Correlations among pathology, radiology, clinical data and automated image analysis software

Lee, Michael J., Bagci, Pelin, Kong, Jun, Vos, Miriam B., Sharma, Puneet, Kalb, Bobby, Saltz, Joel H., Martin, Diego R., Adsay, N. Volkan, Farris, Alton B.

Journal:

Pathology - Research and Practice

Year:

2013

Language:

english

File:

PDF, 372 KB

english, 2013

23

[IEEE 2011 8th IEEE International Symposium on Biomedical Imaging (ISBI 2011) - Chicago, IL, USA (2011.03.30-2011.04.2)] 2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro - A comprehensive framework for classification of nuclei in digital microscopy imaging: An application to diffuse gliomas

Kong, Jun, Cooper, Lee, Wang, Fusheng, Chisolm, Candace, Moreno, Carlos, Kurc, Tahsin, Widener, Patrick, Brat, Daniel, Saltz, Joel

Year:

2011

Language:

english

File:

PDF, 769 KB

english, 2011

24

A data model and database for high-resolution pathology analytical image informatics

Kurc, Tahsin, Sharma, Ashish, Oh, TaeW, Farris, AltonB, Saltz, Joel, Wang, Fusheng, Cooper, Lee, Kong, Jun, Pan, Tony, Chen, Wenjin, Niedermayr, Cristobal, Brat, Daniel, Foran, DavidJ

Journal:

Journal of Pathology Informatics

Year:

2011

Language:

english

File:

PDF, 1.68 MB

english, 2011

25

[ACM Press the 2006 ACM/IEEE conference - Tampa, Florida (2006.11.11-2006.11.17)] Proceedings of the 2006 ACM/IEEE conference on Supercomputing - SC '06 - Imaging and visual analysis---Large image correction and warping in a cluster environment

Kumar, Vijay S., Rutt, Benjamin, Kurc, Tahsin, Catalyurek, Umit, Saltz, Joel, Chow, Sunny, Lamont, Stephan, Martone, Maryann

Year:

2006

Language:

english

File:

PDF, 385 KB

english, 2006

26

Run-Time and Compiler Support for Programming in Adaptive Parallel Environments

Edjlali, Guy, Guyagrawal, Gagan, Sussman, Alan, Humphries, Jim, Saltz, Joel

Journal:

Scientific Programming

Year:

1997

Language:

english

File:

PDF, 2.20 MB

english, 1997

27

PRISM: A Platform for Imaging in Precision Medicine

Sharma, Ashish, Tarbox, Lawrence, Kurc, Tahsin, Bona, Jonathan, Smith, Kirk, Kathiravelu, Pradeeban, Bremer, Erich, Saltz, Joel H., Prior, Fred

Journal:

JCO Clinical Cancer Informatics

Year:

2020

File:

PDF, 1.10 MB

2020

28

[IEEE 2006 International Conference of the IEEE Engineering in Medicine and Biology Society - New York, NY, USA (2006.08.30-2006.09.3)] 2006 International Conference of the IEEE Engineering in Medicine and Biology Society - Image Analysis for Neuroblastoma Classification: Segmentation of Cell Nuclei

Gurcan, Metin N., Pan, Tony, Shimada, Hiro, Saltz, Joel

Year:

2006

Language:

english

File:

PDF, 739 KB

english, 2006

29

[IEEE 2007 8th IEEE/ACM International Conference on Grid Computing - Austin, TX, USA (2007.09.19-2007.09.21)] 2007 8th IEEE/ACM International Conference on Grid Computing - Optimizing multiple queries on scientific datasets with partial replicas

Weng, Li, Catalyurek, Umit, Kurc, Tahsin, Agrawal, Gagan, Saltz, Joel

Year:

2007

Language:

english

File:

PDF, 382 KB

english, 2007

30

[IEEE 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Arlington, VA, USA (2007.04.12-2007.04.15)] 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - IMAGE ANALYSIS FOR AUTOMATED ASSESSMENT OF GRADE OF NEUROBLASTIC DIFFERENTIATION

Kong, Jun, Shimada, Hiroyuki, Boyer, Kim, Saltz, Joel, Gurcan, Metin

Year:

2007

Language:

english

File:

PDF, 421 KB

english, 2007

31

Computational Pathology

Louis, David N., Feldman, Michael, Carter, Alexis B., Dighe, Anand S., Pfeifer, John D., Bry, Lynn, Almeida, Jonas S., Saltz, Joel, Braun, Jonathan, Tomaszewski, John E., Gilbertson, John R., Sinard,

Journal:

Archives of Pathology & Laboratory Medicine

Year:

2015

Language:

english

File:

PDF, 502 KB

english, 2015

32

ImageMiner: a software system for comparative analysis of tissue microarrays using content-based image retrieval, high-performance computing, and grid technology

Foran, David J, Yang, Lin, Chen, Wenjin, Hu, Jun, Goodell, Lauri A, Reiss, Michael, Wang, Fusheng, Kurc, Tahsin, Pan, Tony, Sharma, Ashish, Saltz, Joel H

Journal:

Journal of the American Medical Informatics Association

Year:

2011

Language:

english

File:

PDF, 1.45 MB

english, 2011

33

Stroma classification for neuroblastoma on graphics processors

Ruiz, Antonio, Sertel, Olcay, Ujaldon, Manuel, Catalyurek, Umit, Saltz, Joel, Gurcan, Metin N.

Journal:

International Journal of Data Mining and Bioinformatics

Year:

2009

Language:

english

File:

PDF, 3.52 MB

english, 2009

34

Execution time support for adaptive scientific algorithms on distributed memory machines

Harry Berryman, Joel Saltz, Jeffrey Scroggs

Journal:

Concurrency and Computation: Practice and Experience

Year:

1991

Language:

english

File:

PDF, 1.16 MB

english, 1991

35

Summing up: lessons from a comprehensive community prevention trial

Harold D. Holder, Robert F. Saltz, Joel W. Grube, Andrew J. Treno, Robert I. Reynolds, Robert B. Voas, Paul J. Gruenewald

Journal:

Year:

1997

Language:

english

File:

PDF, 148 KB

english, 1997

36

Optimizing latency and throughput of application workflows on clusters

Naga Vydyanathan, Umit Catalyurek, Tahsin Kurc, Ponnuswamy Sadayappan, Joel Saltz

Journal:

Parallel Computing

Year:

2011

Language:

english

File:

PDF, 1.44 MB

english, 2011

37

caGrid 1.0: An Enterprise Grid Infrastructure for Biomedical Research

Scott Oster, Stephen Langella, Shannon Hastings, David Ervin, Ravi Madduri, Joshua Phillips, Tahsin Kurc, Frank Siebenlist, Peter Covitz, Krishnakant Shanbhag, Ian Foster, Joel Saltz

Journal:

Journal of the American Medical Informatics Association

Year:

2008

Language:

english

File:

PDF, 1.61 MB

english, 2008

38

[ACM Press the 2001 ACM/IEEE conference - Denver, Colorado (2001.11.10-2001.11.16)] Proceedings of the 2001 ACM/IEEE conference on Supercomputing (CDROM) - Supercomputing '01 - Efficient execution of multiple query workloads in data analysis applications

Andrade, Henrique, Kurc, Tahsin, Sussman, Alan, Saltz, Joel

Year:

2001

Language:

english

File:

PDF, 189 KB

english, 2001

39

[ACM Press the 16th international conference - New York, New York, USA (2002.06.22-2002.06.26)] Proceedings of the 16th international conference on Supercomputing - ICS '02 - Compiler supported high-level abstractions for sparse disk-resident datasets

Ferreira, Renato, Agrawal, Gagan, Saltz, Joel

Year:

2002

Language:

english

File:

PDF, 251 KB

english, 2002

40

[ACM Press the 1997 ACM SIGMETRICS international conference - Seattle, Washington, United States (1997.06.15-1997.06.18)] Proceedings of the 1997 ACM SIGMETRICS international conference on Measurement and modeling of computer systems - SIGMETRICS '97 - The utility of exploiting idle workstations for parallel computation

Acharya, Anurag, Edjlali, Guy, Saltz, Joel

Year:

1997

Language:

english

File:

PDF, 1.91 MB

english, 1997

41

Geographic, Temporal, and Sociodemographic Differences in Opioid Poisoning

Schoenfeld, Elinor R., Leibowitz, George S., Wang, Yu, Chen, Xin, Hou, Wei, Rashidian, Sina, Saltz, Mary M., Saltz, Joel H., Wang, Fusheng

Journal:

American Journal of Preventive Medicine

Year:

2019

Language:

english

File:

PDF, 1.44 MB

english, 2019

42

Run-time scheduling and execution of loops on message passing machines

Joel Saltz, Kathleen Crowley, Ravi Michandaney, Harry Berryman

Journal:

Journal of Parallel and Distributed Computing

Year:

1990

Language:

english

File:

PDF, 1.08 MB

english, 1990

43

Distinct proteome features of plasma microparticles

Ming Jin, Garry Drwal, Tran Bourgeois, Joel Saltz, Haifeng M. Wu

Journal:

Year:

2005

Language:

english

File:

PDF, 740 KB

english, 2005

44

A community prevention trial to reduce alcohol-involved accidental injury and death: overview

HAROLD D. HOLDER, ROBERT F. SALTZ, JOEL W. GRUBE, ROBERT B. VOAS, PAUL J. GRUENEWALD, ANDREW J. TRENO

Journal:

Year:

1997

Language:

english

File:

PDF, 1.25 MB

english, 1997

45

[ACM Press the 6th international conference - Washington, D. C., United States (1992.07.19-1992.07.24)] Proceedings of the 6th international conference on Supercomputing - ICS '92 - Compiler and runtime support for irregularly coupled regular meshes

Chase, Craig, Crowley, Kay, Saltz, Joel, Reeves, Anthony

Year:

1992

Language:

english

File:

PDF, 1024 KB

english, 1992

46

A Run-time System for Efficient Execution of Scientific Workflows on Distributed Environments

George Teodoro, Tulio Tavares, Renato Ferreira, Tahsin Kurc, Wagner Meira, Dorgival Guedes, Tony Pan, Joel Saltz

Journal:

International Journal of Parallel Programming

Year:

2008

Language:

english

File:

PDF, 494 KB

english, 2008

47

Histopathological Image Analysis Using Model-Based Intermediate Representations and Color Texture: Follicular Lymphoma Grading

Olcay Sertel, Jun Kong, Umit V. Catalyurek, Gerard Lozanski, Joel H. Saltz, Metin N. Gurcan

Journal:

Journal of Signal Processing Systems

Year:

2009

Language:

english

File:

PDF, 1.02 MB

english, 2009

48

[IEEE 2014 IEEE International Parallel & Distributed Processing Symposium (IPDPS) - Phoenix, AZ, USA (2014.5.19-2014.5.23)] 2014 IEEE 28th International Parallel and Distributed Processing Symposium - Comparative Performance Analysis of Intel (R) Xeon Phi (TM), GPU, and CPU: A Case Study from Microscopy Image Analysis

Teodoro, George, Kurc, Tahsin, Kong, Jun, Cooper, Lee, Saltz, Joel

Year:

2014

Language:

english

File:

PDF, 521 KB

english, 2014

49

[IEEE 2011 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Atlanta, GA, USA (2011.11.12-2011.11.15)] 2011 IEEE International Conference on Bioinformatics and Biomedicine - Computer-Based Image Analysis of Liver Steatosis with Large-Scale Microscopy Imagery and Correlation with Magnetic Resonance Imaging Lipid Analysis

Kong, Jun, Lee, Michael J., Bagci, Pelin, Sharma, Puneet, Martin, Diego, Adsay, N. Volkan, Saltz, Joel H., Farris, Alton B.

Year:

2011

Language:

english

File:

PDF, 878 KB

english, 2011

50

[ACM Press the 2005 ACM symposium - Santa Fe, New Mexico (2005.03.13-2005.03.17)] Proceedings of the 2005 ACM symposium on Applied computing - SAC '05 - Grid-based management of biomedical data using an XML-based distributed data management system

Hastings, Shannon, Langella, Stephen, Oster, Scott, Kurc, Tahsin, Pan, Tony, Catalyurek, Umit, Janies, Dan, Saltz, Joel

Year:

2005

Language:

english

File:

PDF, 210 KB

english, 2005

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